Publications

Selected Publications by SCSB Faculty

Last Updated April 2021

2020

  • Dreskin SC, Koppelman SJ, Andorf S, Nadeau KC, Kalra A, Braun W, Negi SS, Chen X, Schein CH. The importance of the 2S albumins for allergenicity and cross-reactivity of peanuts, tree nuts, and sesame seeds. J Allergy Clin Immunol. 2020 Nov 18:S0091-6749(20)31589-X. doi: 10.1016/j.jaci.2020.11.004.
  • Baker WS, Negi S, Braun W, Schein CH. Producing physicochemical property consensus alphavirus protein antigens for broad spectrum vaccine design. Antiviral Res. 2020 Oct;182:104905. doi: 10.1016/j.antiviral.2020.104905.
  • Gottipati K, Woodson M, Choi KH. Membrane binding and rearrangement by chikungunya virus capping enzyme nsP1 Virology. 2020;544:31–41. doi:10.1016/j.virol.2020.02.006.
  • Bujalowski PJ, Bujalowski W, Choi KH. Identification of the viral RNA promoter stem loop A (SLA)-binding site on Zika virus polymerase NS5. Sci Rep. 2020;10(1):13306. doi:10.1038/s41598-020-70094-y.
  • Narra HP, Sahni A, Alsing J, Schroeder CLC, Golovko G, Nia AM, Fofanov Y, Khanipov K, Sahni SK. Comparative transcriptomic analysis of Rickettsia conorii during in vitro infection of human and tick host cells. BMC Genomics. 2020 Sep 25;21(1):665. doi: 10.1186/s12864-020-07077-w.
  • Golovko G, Kamil K, Albayrak L, Nia AM, Duarte RSA, Chumakov S, Fofanov Y. Identification of multidimensional Boolean patterns in microbial communities. Microbiome. 2020 Sep 11;8(1):131. doi: 10.1186/s40168-020-00853-6.
  • Patterson, E. I., Khanipov, K., Swetnam, D. M., Walsdorf, S., Kautz, T. F., Thangamani, S., Fofanov, Y., & Forrester, N. L. Measuring Alphavirus Fidelity Using Non-Infectious Virus Particles. Viruses, 2020;12(5), 546. https://doi.org/10.3390/v12050546.
  • Aguirre JE, Beswick EJ, Grim C, Uribe G, Tafoya M, Chacon Palma G, Samedi V, McKee R, Villeger R, Fofanov Y, Cong Y, Yochum G, Koltun W, Powell D, Pinchuk IV. Matrix metalloproteinases cleave membrane-bound PD-L1 on CD90+ (myo-)fibroblasts in Crohn's disease and regulate Th1/Th17 cell responses. Int Immunol. 2020, 32(1):57-68. doi: 10.1093/intimm/dxz060.
  • Zhou D, Tanzawa T, Lin J, Gagnon MG. Structural basis for ribosome recycling by RRF and tRNA. Nat Struct Mol Biol. 2020, 27(1):25-32. doi: 10.1038/s41594-019-0350-7.
  • Iwahara J, Kolomeisky AB. Discrete-state stochastic kinetic models for target DNA search by proteins: Theory and experimental applications. Biophys Chem. 2020 Dec 10;269:106521. doi: 10.1016/j.bpc.2020.106521.
  • Yu B, Pettitt BM, Iwahara J. Dynamics of Ionic Interactions at Protein-Nucleic Acid Interfaces. Acc Chem Re. 2020 Sep 15;53(9):1802-1810. doi: 10.1021/acs.accounts.0c00212.
  • Nepravishta R, Pletka CC, Iwahara J. Racemic phosphorothioate as a tool for NMR investigations of protein-DNA complexes. J Biomol NMR. 2020;10.1007/s10858-020-00333-x. doi:10.1007/s10858-020-00333-x.
  • Yu B, Pletka CC, Iwahara J. NMR Observation of Intermolecular Hydrogen Bonds between Protein Tyrosine Side-Chain OH and DNA Phosphate Groups. J Phys Chem B. 2020, doi: 10.1021/acs.jpcb.9b10987.
  • Nepravishta R, Yu B, Iwahara J. Hydrogen-exchange kinetics studied through analysis of self-decoupling of nuclear magnetic resonance. J Magn Reson. 2020;312:106687. doi:10.1016/j.jmr.2020.106687.
  • Pletka CC, Nepravishta R, Iwahara J. Detecting Counterion Dynamics in DNA-Protein Association. Angew Chem Int Ed Engl. 2020, 59(4):1465-1468. doi: 10.1002/anie.201910960.
  • Singh MK, Kenney LJ. Super-resolution imaging of bacterial pathogens and visualization of their secreted effectors. FEMS Microbiol Rev. 2020 Sep 24:fuaa050. doi: 10.1093/femsre/fuaa050.
  • Kenney LJ, Anand GS. EnvZ/OmpR Two-Component Signaling: An Archetype System That Can Function Noncanonically. EcoSal Plus. 2020;9(1):10.1128/ecosalplus.ESP-0001-2019. doi:10.1128/ecosalplus.ESP-0001-2019.
  • Taylor NMI, Leiman PG. Editorial overview: Virus structure and expression. Curr Opin Virol. 2020 Dec;45:iii-v. doi: 10.1016/j.coviro.2020.11.005.
  • Drobysheva AV, Panafidina SA, Kolesnik MV, Klimuk EI, Minakhin L, Yakunina MV, Borukhov S, Nilsson E, Holmfeldt K, Yutin N, Makarova KS, Koonin EV, Severinov KV, Leiman PG, Sokolova ML. Structure and function of virion RNA polymerase of a crAss-like phage. Nature. 2020 Nov 18. doi: 10.1038/s41586-020-2921-5.
  • Wenzel S, Shneider MM, Leiman PG, Kuhn A, Kiefer D. The Central Spike Complex of Bacteriophage T4 Contacts PpiD in the Periplasm of Escherichia coli. Viruses. 2020 Oct 6;12(10):1135. doi: 10.3390/v12101135.
  • Kanamaru S, Uchida K, Nemoto M, Fraser A, Arisaka F, Leiman PG. Structure and Function of the T4 Spackle Protein Gp61.3. Viruses. 2020 Sep 24;12(10):1070. doi: 10.3390/v12101070.
  • Greenfield J, Shang X, Luo H, Zhou Y, Linden SB, Heselpoth RD, Leiman PG, Nelson DC, Herzberg O. Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7. Sci Rep. 2020 Sep 21;10(1):15402. doi: 10.1038/s41598-020-72373-0.
  • Ge, P., Scholl, D., Prokhorov, N. S., Avaylon, J., Shneider, M. M., Browning, C., Buth, S. A., Plattner, M., Chakraborty, U., Ding, K., Leiman, P. G., Miller, J. F., & Zhou, Z. H. Action of a minimal contractile bactericidal nanomachine. Nature, 2020;580(7805), 658–662. https://doi.org/10.1038/s41586-020.
  • Reyes-Aldrete E, Dill EA, Bussetta C, Szymanski MR, Diemer G, Maindola P, White MA, Bujalowski WM, Choi KH, Morais MC. Biochemical and Biophysical Characterization of the dsDNA Packaging Motor from the Lactococcus lactis Bacteriophage Asccphi28. Viruses. 2020 Dec 23;13(1):E15. doi: 10.3390/v13010015.
  • Mahler BP, Bujalowski PJ, Mao H, Dill EA, Jardine PJ, Choi KH, Morais MC. NMR structure of a vestigial nuclease provides insight into the evolution of functional transitions in viral dsDNA packaging motors. Nucleic Acids Res. 2020 Nov 18;48(20):11737-11749. doi: 10.1093/nar/gkaa874.
  • Giraldo MI, Xia H, Aguilera-Aguirre L, Hage A, van Tol S, Shan C, Xie X, Sturdevant GL, Robertson SJ, McNally KL, Meade-White K, Azar SR, Rossi SL, Maury W, Woodson M, Ramage H, Johnson JR, Krogan NJ, Morais MC, Best SM, Shi PY, Rajsbaum R. Envelope protein ubiquitination drives entry and pathogenesis of Zika virus. Nature. 2020 Jul 8. doi: 10.1038/s41586-020-2457-8.
  • Tan TY, Fibriansah G, Kostyuchenko VA, Ng TS, Lim XX, Zhang S, Lim XN, Wang J, Shi J, Morais MC, Corti D, Lok SM. Capsid protein structure in Zika virus reveals the flavivirus assembly process. Nat Commun. 2020;11(1):895. doi:10.1038/s41467-020-14647-9.
  • Qadota H, Luo Y, Oberhauser AF, Benian GM. Genetic analysis of the interaction between the N- and C-terminal halves of UNC-112 (kindlin). MicroPubl Biol. 2020 Dec 17;2020:10.17912/micropub.biology.000342. doi: 10.17912/micropub.biology.000342.
  • Marszalek PE, Oberhauser AF. Meeting report - NSF-sponsored workshop 'Progress and Prospects of Single-Molecule Force Spectroscopy in Biological and Chemical Sciences'. J Cell Sci. 2020 Aug 17;133(16):jcs251421. doi:10.1242/jcs.251421.
  • Gaziova I, Moncrief T, Christian CJ, Villarreal M, Powell S, Lee H, Qadota H, White MA, Benian GM, Oberhauser AF. Mutational Analysis of the Structure and Function of the Chaperoning Domain of UNC-45B. Biophys J. 2020 Jul 22:S0006-3495(20)30562-2. doi: 10.1016/j.bpj.2020.07.012.
  • Qadota H, Moody JC, Lesanpezeshki L, Moncrief T, Kitzler D, Bhat PD, Vanapalli SA, Oberhauser AF, Benian GM. A Region of UNC-89 (Obscurin) Lying between Two Protein Kinase Domains Is a Highly Elastic Spring Required for Proper Sarcomere Organization. J Mol Biol. 2020 Aug 7;432(17):4799-4814. doi: 10.1016/j.jmb.2020.06.024.
  • Goldson TM, Turner KL, Huang Y, Carlson GE, Caggiano EG, Oberhauser AF, Fennewald SM, Burdick MM, Resto VA. Nucleolin mediates the binding of cancer cells to L-selectin under conditions of lymphodynamic shear stress. Am J Physiol Cell Physiol. 2020, 318(1):C83-C93. doi: 10.1152/ajpcell.00035.2019.
  • Pettitt BM, Schwartz BJ, Sterpone F, Túri L, Willard AP. Tribute to Peter J. Rossky. J Phys Chem B. 2020 Nov 25;124(47):10591-10593. doi: 10.1021/acs.jpcb.0c09810.
  • Bores C, Woodson M, Morais MC, Pettitt BM. Effects of Model Shape, Volume, and Softness of the Capsid for DNA Packaging of phi29. J Phys Chem B. 2020 Nov 19;124(46):10337-10344. doi: 10.1021/acs.jpcb.0c07478.
  • Drake JA, Pettitt BM. Physical Chemistry of the Protein Backbone: Enabling the Mechanisms of Intrinsic Protein Disorder. J Phys Chem B. 2020 Jun 4;124(22):4379-4390. doi: 10.1021/acs.jpcb.0c02489.
  • Lai CL, Chen C, Ou SC, Prentiss M, Pettitt BM. Interactions between identical DNA double helices. Phys Rev E. 2020 Mar;101(3-1):032414. doi: 10.1103/PhysRevE.101.032414.
  • Seckfort D, Lynch GC, Pettitt BM. The lac repressor hinge helix in context: The effect of the DNA binding domain and symmetry. Biochim Biophys Acta Gen Subj. 2020, 1864(4):129538. doi: 10.1016/j.bbagen.2020.129538.
  • Bores C, Pettitt BM. Structure and the role of filling rate on model dsDNA packed in a phage capsid. Physical Review E. 2020, 101, 012406. doi: 10.1103/PhysRevE.101.012406.
  • Sepuru KM, Nair V, Prakash P, Gorfe AA, Rajarathnam K. Long-Range Coupled Motions Underlie Ligand Recognition by a Chemokine Receptor. iScience. 2020 Nov 26;23(12):101858. doi: 10.1016/j.isci.2020.101858.
  • Sawant KV, Sepuru KM, Lowry E, Penaranda B, Frevert CW, Garofalo RP, Rajarathnam K. Neutrophil recruitment by chemokines Cxcl1/KC and Cxcl2/MIP2: Role of Cxcr2 activation and glycosaminoglycan interactions. J Leukoc Biol. 2020 Sep 2. doi: 10.1002/JLB.3A0820-207R.
  • Rajarathnam K, Desai UR. Structural Insights Into How Proteoglycans Determine Chemokine-CXCR1/CXCR2 Interactions: Progress and Challenges. Front Immunol. 2020 Apr 24;11:660. doi: 10.3389/fimmu.2020.00660.
  • Coon JI, Jain S, Sepuru KM, Chung Y, Mohankumar K, Rajarathnam K, Jain SK. Lyophilization of human amniotic fluid is feasible without affecting biological activity. Pediatr Res. 2020 Apr;87(5):847-852. doi: 10.1038/s41390-019-0632-0.
  • Langsjoen RM, Muruato AE, Kunkel SR, Jaworski E, Routh A. Differential Alphavirus Defective RNA Diversity between Intracellular and Extracellular Compartments Is Driven by Subgenomic Recombination Events. mBio. 2020 Aug 18;11(4):e00731-20. doi: 10.1128/mBio.00731-20.
  • Kautz TF, Jaworski E, Routh A, Forrester NL. A Low Fidelity Virus Shows Increased Recombination during the Removal of an Alphavirus Reporter Gene. Viruses. 2020 Jun 19;12(6):660. doi: 10.3390/v12060660.
  • Sotcheff S, Routh A. Understanding Flavivirus Capsid Protein Functions: The Tip of the Iceberg. Pathogens. 2020, 9(1):E42. doi: 10.3390/pathogens9010042.
  • Zhou Y, Routh A. Mapping RNA-capsid interactions and RNA secondary structure within virus particles using next-generation sequencing. Nucleic Acids Res. 2020, 48(2):e12. doi: 10.1093/nar/gkz1124.
  • Li Y, Liu Z, Aglyamova G, Chen J, Chen H, Bhandari M, White MA, Rudenko G, Zhou J. Discovery of phenanthridine analogues as novel chemical probes disrupting the binding of DNA to ΔFosB homodimers and ΔFosB/JunD heterodimers. Bioorg Med Chem Lett. 2020 Aug 15;30(16):127300. doi: 10.1016/j.bmcl.2020.127300.
  • Venkannagari H, Kasper JM, Misra A, Rush SA, Fan S, Lee H, Sun H, Seshadrinathan S, Machius M, Hommel JD, Rudenko G. Highly Conserved Molecular Features in IgLONs Contrast Their Distinct Structural and Biological Outcomes. J Mol Biol. 2020 Jul 22:S0022-2836(20)30461-7. doi: 10.1016/j.jmb.2020.07.014.
  • Li Y, Liu Z, Aglyamova G, Chen J, Chen H, Bhandari M, White MA, Rudenko G, Zhou J. Discovery of phenanthridine analogues as novel chemical probes disrupting the binding of DNA to ΔFosB homodimers and ΔFosB/JunD heterodimers. Bioorg Med Chem Lett. 2020 Aug 15;30(16):127300. doi: 10.1016/j.bmcl.2020.127300.
  • Yin Z, Venkannagaria H, Lynch H, Aglyamova G, Bhandari M, Machius M, Nestler EJ, Robison AJ, Rudenko G. Self-assembly of the bZIP transcription factor ΔFosB. Current Research in Structural Biology. 2020, 2:1-13. doi: 10.1016/j.crstbi.2019.12.001. 
  • Doss BL, Pan M, Gupta M, Grenci G, Mège RM, Lim CT, Sheetz MP, Voituriez R, Ladoux B. Cell response to substrate rigidity is regulated by active and passive cytoskeletal stress. Proc Natl Acad Sci U S A. 2020 Jun 9;117(23):12817-12825. doi: 10.1073/pnas.1917555117.
  • Yang B, Wolfenson H, Chung VY, Nakazawa N, Liu S, Hu J, Huang RY, Sheetz MP. Stopping transformed cancer cell growth by rigidity sensing. Nat Mater. 2020;19(2):239–250. doi:10.1038/s41563-019-0507-0.
  • Xia H, Shi PY. Antagonism of Type I Interferon by Severe Acute Respiratory Syndrome Coronavirus 2. J Interferon Cytokine Res. 2020 Dec;40(12):543-548. doi: 10.1089/jir.2020.0214.
  • Baker C, Liu Y, Zou J, Muruato A, Xie X, Shi PY. Identifying optimal capsid duplication length for the stability of reporter flaviviruses. Emerg Microbes Infect. 2020 Dec;9(1):2256-2265. doi: 10.1080/22221751.2020.1829994.
  • Plante JA, Liu Y, Liu J, Xia H, Johnson BA, Lokugamage KG, Zhang X, Muruato AE, Zou J, Fontes-Garfias CR, Mirchandani D, Scharton D, Bilello JP, Ku Z, An Z, Kalveram B, Freiberg AN, Menachery VD, Xie X, Plante KS, Weaver SC, Shi PY. Spike mutation D614G alters SARS-CoV-2 fitness. Nature. 2020 Oct 26. doi: 10.1038/s41586-020-2895-3.
  • Xie X, Muruato AE, Zhang X, Lokugamage KG, Fontes-Garfias CR, Zou J, Liu J, Ren P, Balakrishnan M, Cihlar T, Tseng CK, Makino S, Menachery VD, Bilello JP, Shi PY. A nanoluciferase SARS-CoV-2 for rapid neutralization testing and screening of anti-infective drugs for COVID-19. Nat Commun. 2020 Oct 15;11(1):5214. doi: 10.1038/s41467-020-19055-7.
  • Baker C, Shi PY. Construction of Stable Reporter Flaviviruses and Their Applications. Viruses. 2020 Sep 25;12(10):1082. doi: 10.3390/v12101082.
  • Xia H, Cao Z, Xie X, Zhang X, Chen JY, Wang H, Menachery VD, Rajsbaum R, Shi PY. Evasion of Type I Interferon by SARS-CoV-2. Cell Rep. 2020 Oct 6;33(1):108234. doi: 10.1016/j.celrep.2020.108234. Epub 2020 Sep 19.
  • Shi PY, Plante J, Liu Y, Liu J, Xia H, Johnson B, Lokugamage K, Zhang X, Muruato A, Zou J, Fontes-Garfias C, Mirchandani D, Scharton D, Kalveram B, Bilello J, Ku Z, An Z, Freiberg A, Menachery V, Xie X, Plante K, Weaver S. Spike mutation D614G alters SARS-CoV-2 fitness and neutralization susceptibility. Res Sq [Preprint]. 2020 Sep 10:rs.3.rs-70482. doi: 10.21203/rs.3.rs-70482/v1. Update in: Nature. 2020 Oct 26.
  • Plante JA, Liu Y, Liu J, Xia H, Johnson BA, Lokugamage KG, Zhang X, Muruato AE, Zou J, Fontes-Garfias CR, Mirchandani D, Scharton D, Bilello JP, Ku Z, An Z, Kalveram B, Freiberg AN, Menachery VD, Xie X, Plante KS, Weaver SC, Shi PY. Spike mutation D614G alters SARS-CoV-2 fitness and neutralization susceptibility. bioRxiv [Preprint]. 2020 Sep 2:2020.09.01.278689. doi: 10.1101/2020.09.01.278689. Update in: Nature. 2020 Oct 26.
  • Shan C, Xia H, Haller SL, Azar SR, Liu Y, Liu J, Muruato AE, Chen R, Rossi SL, Wakamiya M, Vasilakis N, Pei R, Fontes-Garfias CR, Singh SK, Xie X, Weaver SC, Shi PY. A Zika virus envelope mutation preceding the 2015 epidemic enhances virulence and fitness for transmission. Proc Natl Acad Sci U S A. 2020 Aug 3:202005722. doi: 10.1073/pnas.2005722117.
  • Xia H, Xie X, Zou J, Noble CG, Russell WK, Holthauzen LMF, Choi KH, White MA, Shi PY. A cocrystal structure of dengue capsid protein in complex of inhibitor. Proc Natl Acad Sci U S A. 2020 Jul 28;117(30):17992-18001. doi: 10.1073/pnas.2003056117.
  • Baker C, Xie X, Zou J, Muruato A, Fink K, Shi PY. Using recombination-dependent lethal mutations to stabilize reporter flaviviruses for rapid serodiagnosis and drug discovery. EBioMedicine. 2020 Jul;57:102838. doi: 10.1016/j.ebiom.2020.102838.
  • Xie X, Muruato A, Lokugamage KG, Narayanan K, Zhang X, Zou J, Liu J, Schindewolf C, Bopp NE, Aguilar PV, Plante KS, Weaver SC, Makino S, LeDuc JW, Menachery VD, Shi PY. An Infectious cDNA Clone of SARS-CoV-2. Cell Host Microbe. 2020 May 13;27(5):841-848.e3. doi: 10.1016/j.chom.2020.04.004.
  • Muruato AE, Fontes-Garfias CR, Ren P, Garcia-Blanco MA, Menachery VD, Xie X, Shi PY. A high-throughput neutralizing antibody assay for COVID-19 diagnosis and vaccine evaluation. bioRxiv [Preprint]. 2020 May 22:2020.05.21.109546. doi: 10.1101/2020.05.21.109546.
  • Zhang QY, Li XF, Niu X, Li N, Wang HJ, Deng CL, Ye HQ, Huang XY, Chen Q, Xu YP, Dong HL, Li XD, Zhao H, Shi PY, Yuan ZM, Gong P, Fang X, Qin CF, Zhang B. Short direct repeats in the 3'-untranslated region are involved in subgenomic flaviviral RNA production. J Virol. 2020, doi: 10.1128/JVI.01175-19.
  • Sowers LC, Blanton LS, Weaver SC, Urban RJ, Mouton CP. Pharmacological approaches to the treatment of COVID-19 patients. J Transl Sci. 2020 Dec;6(6):394.
  • Sherman MB, Smith HQ, Smith TJ. The Dynamic Life of Virus Capsids. Viruses. 2020 Jun 5;12(6):618. doi: 10.3390/v12060618.
  • Sherman MB, Guenther R, Reade R, Rochon D, Sit T, Smith TJ. Near-Atomic-Resolution Cryo-Electron Microscopy Structures of Cucumber Leaf Spot Virus and Red Clover Necrotic Mosaic Virus: Evolutionary Divergence at the Icosahedral Three-Fold Axes. J Virol. 2020, 94(2):e01439-19. doi: 10.1128/JVI.01439-19.
  • Huang KL, Jee D, Stein CB, Elrod ND, Henriques T, Mascibroda LG, Baillat D, Russell WK, Adelman K, Wagner EJ. Integrator Recruits Protein Phosphatase 2A to Prevent Pause Release and Facilitate Transcription Termination. Mol Cell. 2020 Oct 15;80(2):345-358.e9. doi: 10.1016/j.molcel.2020.08.016.
  • Alcott CE, Yalamanchili HK, Ji P, van der Heijden ME, Saltzman A, Elrod N, Lin A, Leng M, Bhatt B, Hao S, Wang Q, Saliba A, Tang J, Malovannaya A, Wagner EJ, Liu Z, Zoghbi HY. Partial loss of CFIm25 causes learning deficits and aberrant neuronal alternative polyadenylation. Elife. 2020 Apr 22;9:e50895. doi: 10.7554/eLife.50895.
  • Yalamanchili HK, Alcott CE, Ji P, Wagner EJ, Zoghbi HY, Liu Z. PolyA-miner: accurate assessment of differential alternative poly-adenylation from 3'Seq data using vector projections and non-negative matrix factorization. Nucleic Acids Res. 2020 Jul 9;48(12):e69. doi: 10.1093/nar/gkaa398.
  • Weng T, Huang J, Wagner EJ, Ko J, Wu M, Wareing NE, Xiang Y, Chen NY, Ji P, Molina JG, Volcik KA, Han L, Mayes MD, Blackburn MR, Assassi S. Downregulation of CFIm25 amplifies dermal fibrosis through alternative polyadenylation. J Exp Med. 2020, 217(2):e20181384. doi: 10.1084/jem.20181384.
  • Campos RK, Saada N, Rossi SL, Weaver SC. Thermally bonded disinfectant for self-decontamination of fabric against SARS-CoV-2. J Hosp Infect. 2020 Dec;106(4):835-836. doi: 10.1016/j.jhin.2020.09.008.
  • Rossi SL, Russell-Lodrigue KE, Plante KS, Bergren NA, Gorchakov R, Roy CJ, Weaver SC. Rationally Attenuated Vaccines for Venezuelan Equine Encephalitis Protect Against Epidemic Strains with a Single Dose. Vaccines (Basel). 2020 Sep 2;8(3):497. doi: 10.3390/vaccines8030497.
  • Eastwood G, Sang RC, Lutomiah J, Tunge P, Weaver SC. Sylvatic Mosquito Diversity in Kenya-Considering Enzootic Ecology of Arboviruses in an Era of Deforestation. Insects. 2020 Jun 3;11(6):342. doi: 10.3390/insects11060342.
  • Ribeiro GS, Hamer GL, Diallo M, Kitron U, Ko AI, Weaver SC. Influence of herd immunity in the cyclical nature of arboviruses. Curr Opin Virol. 2020;40:1–10. doi:10.1016/j.coviro.2020.02.004.
  • Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W. Arrangement of the Polymerase Complexes inside a Nine-Segmented dsRNA Virus. Structure. 2020;S0969-2126(20)30011-3. doi:10.1016/j.str.2020.01.011.
  • Bergren NA, Haller S, Rossi SL, Seymour RL, Huang J, Miller AL, Bowen RA, Hartman DA, Brault AC, Weaver SC. "Submergence" of Western equine encephalitis virus: Evidence of positive selection argues against genetic drift and fitness reductions. PLoS Pathog. 2020;16(2):e1008102. doi:10.1371/journal.ppat.1008102.
  • Weaver SC. Incrimination of mosquito vectors. Nat Microbiol. 2020, 5(2):232-233. doi: 10.1038/s41564-019-0665-5.
  • Ahmed A, Dietrich I, LaBeaud AD, Lindsay SW, Musa A, Weaver SC. Risks and Challenges of Arboviral Diseases in Sudan: The Urgent Need for Actions. Viruses. 2020, 12(1):E81. doi: 10.3390/v12010081.
  • Pacheco LD, Weaver SC, Saade GR. Zika Virus Infection - After the Pandemic. N Engl J Med. 2020, 382(2):e3. doi: 10.1056/NEJMc1914974.
  • Jain N, Blauch LR, Szymanski MR, Das R, Tang SKY, Yin YW, Fire AZ. Transcription polymerase-catalyzed emergence of novel RNA replicons. Science. 2020 Apr 10;368(6487):eaay0688. doi: 10.1126/science.aay0688.
  • Singh A, Pandey M, Nandakumar D, Raney KD, Yin YW, Patel SS. Excessive excision of correct nucleotides during DNA synthesis explained by replication hurdles. EMBO J. 2020;39(6):e103367. doi:10.15252/embj.2019103367.
  • Anderson AP, Luo X, Russell W, Yin YW. Oxidative damage diminishes mitochondrial DNA polymerase replication fidelity. Nucleic Acids Res. 2020, 48(2):817-829. doi: 10.1093/nar/gkz1018.