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Publications by SCSB Faculty

Last Update: December, 2017

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    2017

    • Functional classification of protein toxins as a basis for bioinformatic screening. Negi SS, Schein CH, Ladics GS, Mirsky H, Chang P, Rascle JB, Kough J, Sterck L, Papineni S, Jez JM, Pereira Mouriès L, Braun W. Sci Rep. 2017 Oct 24;7(1):13940. doi: 10.1038/s41598-017-13957-1.
    • Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Negi SS., and Braun W. Bioinformatics, 2017, 33(7):1014-1020.
    • Signal and binding. II. Converting physico-chemical responses to macromolecule-ligand interactions into thermodynamic binding isotherms. Bujalowski W, Jezewska MJ, Bujalowski PJ. Biophys Chem. 2017 Mar;222:25-40. doi: 10.1016/j.bpc.2016.12.005. Review.
    • Signal and binding. I. Physico-chemical response to macromolecule-ligand interactions. Bujalowski W, Jezewska MJ, Bujalowski PJ. Biophys Chem. 2017 Mar;222:7-24. doi: 10.1016/j.bpc.2016.12.006. Review.
    • Serotype-specific interactions among functional domains of dengue virus 2 nonstructural proteins (NS) 5 and NS3 are crucial for viral RNA replication. Teramoto T, Balasubramanian A, Choi KH, Padmanabhan R. J Biol Chem. 2017 Jun 9;292(23):9465-9479. doi: 10.1074/jbc.M117.775643.
    • Interactions between the Dengue Virus Polymerase NS5 and Stem-Loop A. Bujalowski PJ, Bujalowski W, Choi KH. J Virol. 2017 May 12;91(11). pii: e00047-17. doi: 10.1128/JVI.00047-17.
    • Assessing the utility of metabarcoding for diet analyses of the omnivorous wild pig (Sus scrofa). Robeson MS 2nd, Khanipov K, Golovko G, Wisely SM, White MD, Bodenchuck M, Smyser TJ, Fofanov Y, Fierer N, Piaggio AJ. Ecol Evol. 2017 Nov 26;8(1):185-196. doi: 10.1002/ece3.3638.
    • Expression Profiling of Long Noncoding RNA Splice Variants in Human Microvascular Endothelial Cells: Lipopolysaccharide Effects In Vitro. Chowdhury IH, Narra HP, Sahni A, Khanipov K, Schroeder CLC, Patel J, Fofanov Y, Sahni SK. Mediators Inflamm. 2017;2017:3427461. doi: 10.1155/2017/3427461.
    • Draft Genome Sequence of Zobellella denitrificans ZD1 (JCM 13380), a Salt-Tolerant Denitrifying Bacterium Capable of Producing Poly(3-Hydroxybutyrate). Wu YW, Shao Y, Khanipov K, Golovko G, Pimenova M, Fofanov Y, Chu KH. Genome Announc. 2017 Sep 7;5(36). pii: e00948-17. doi: 10.1128/genomeA.00948-17.
    • Transcriptional profiling of Rickettsia prowazekii coding and non-coding transcripts during in vitro host-pathogen and vector-pathogen interactions. Schroeder CLC, Narra HP, Sahni A, Khanipov K, Patel J, Fofanov Y, Sahni SK. Ticks Tick Borne Dis. 2017 Oct;8(6):827-836. doi: 10.1016/j.ttbdis.2017.06.008.
    • Nasopharyngeal microbiota in infants and changes during viral upper respiratory tract infection and acute otitis media. Chonmaitree T, Jennings K, Golovko G, Khanipov K, Pimenova M, Patel JA, McCormick DP, Loeffelholz MJ, Fofanov Y. PLoS One. 2017 Jul 14;12(7):e0180630. doi: 10.1371/journal.pone.0180630.
    • Internal Motions of Basic Side Chains of the Antennapedia Homeodomain in the Free and DNA-Bound States. Nguyen D, Hoffpauir ZA, Iwahara J. Biochemistry. 2017 Nov 7;56(44):5866-5869. doi:10.1021/acs.biochem.7b00885.
    • Discrete-State Kinetics Model for NMR-Based Analysis of Protein Translocation on DNA at Equilibrium. Sahu D, Iwahara J. J Phys Chem B. 2017 Oct 19;121(41):9548-9556. doi: 10.1021/acs.jpcb.7b07779.
    • A Unique and Simple Approach to Improve Sensitivity in 15N-NMR Relaxation Measurements for NH3+ Groups: Application to a Protein-DNA Complex. Nguyen D, Lokesh GLR, Volk DE, Iwahara J. Molecules. 2017 Aug 15;22(8). pii: E1355. doi: 10.3390/molecules22081355.
    • Potential role of DNA methylation as a facilitator of target search processes for transcription factors through interplay with methyl-CpG-binding proteins. Kemme CA, Marquez R, Luu RH, Iwahara J. Nucleic Acids Res. 2017 Jul 27;45(13):7751-7759. doi: 10.1093/nar/gkx387.
    • The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence. Olszak T, Shneider MM, Latka A, Maciejewska B, Browning C, Sycheva LV, Cornelissen A, Danis-Wlodarczyk K, Senchenkova SN, Shashkov AS, Gula G, Arabski M, Wasik S, Miroshnikov KA, Lavigne R, Leiman PG, Knirel YA, Drulis-Kawa Z. Sci Rep. 2017 Nov 24;7(1):16302. doi: 10.1038/s41598-017-16411-4.
    • Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit. Zheng W, Wang F, Taylor NMI, Guerrero-Ferreira RC, Leiman PG, Egelman EH. Structure. 2017 Sep 5;25(9):1436-1441.e2. doi: 10.1016/j.str.2017.06.017.
    • The central domain of UNC-45 chaperone inhibits the myosin power stroke. Bujalowski PJ, Nicholls P, Garza E, Oberhauser AF. FEBS Open Bio. 2017 Dec 10;8(1):41-48. doi: 10.1002/2211-5463.12346.
    • Optimal updating magnitude in adaptive flat-distribution sampling. Zhang C, Drake JA, Ma J, Pettitt BM. J Chem Phys. 2017 Nov 7;147(17):174105. doi: 10.1063/1.5008618.
    • Intramolecular Interactions Overcome Hydration to Drive the Collapse Transition of Gly15. Asthagiri D, Karandur D, Tomar DS, Pettitt BM. J Phys Chem B. 2017 Aug 31;121(34):8078-8084. doi: 10.1021/acs.jpcb.7b05469.
    • Influence of DNA sequence on the structure of minicircles under torsional stress. Wang Q, Irobalieva RN, Chiu W, Schmid MF, Fogg JM, Zechiedrich L, Pettitt BM. Nucleic Acids Res. 2017 Jul 27;45(13):7633-7642. doi: 10.1093/nar/gkx516.
    • Phage-like packing structures with mean field sequence dependence. Myers CG, Pettitt BM. J Comput Chem. 2017 Jun 5;38(15):1191-1197. doi: 10.1002/jcc.24727.
    • Nonpolar Solvation Free Energy from Proximal Distribution Functions. Ou SC, Drake JA, Pettitt BM. J Phys Chem B. 2017 Apr 20;121(15):3555-3564. doi: 10.1021/acs.jpcb.6b09528.
    • Direct detection of lysine side chain NH3+ in protein-heparin complexes using NMR spectroscopy. Sepuru KM, Iwahara J, Rajarathnam K. Analyst. 2018 Jan 2. doi: 10.1039/c7an01406f.
    • Glycosaminoglycan Interactions Fine-Tune Chemokine-Mediated Neutrophil Trafficking: Structural Insights and Molecular Mechanisms. Rajarathnam K, Sepuru KM, Joseph PRB, Sawant KV, Brown AJ. J Histochem Cytochem. 2017 Nov 1:22155417739864. doi: 10.1369/0022155417739864.
    • Heparin-bound chemokine CXCL8 monomer and dimer are impaired for CXCR1 and CXCR2 activation: implications for gradients and neutrophil trafficking. Joseph PRB, Sawant KV, Rajarathnam K. Open Biol. 2017 Nov;7(11). pii: 170168. doi: 10.1098/rsob.170168.
    • Platelet-Derived Chemokine CXCL7 Dimer Preferentially Exists in the Glycosaminoglycan-Bound Form: Implications for Neutrophil-Platelet Crosstalk. Brown AJ, Sepuru KM, Sawant KV, Rajarathnam K. Front Immunol. 2017 Oct 2;8:1248. doi: 10.3389/fimmu.2017.01248.
    • Regulation of Chemokine Function: The Roles of GAG-Binding and Post-Translational Nitration. Thompson S, Martínez-Burgo B, Sepuru KM, Rajarathnam K, Kirby JA, Sheerin NS, Ali S. Int J Mol Sci. 2017 Aug 3;18(8). pii: E1692. doi: 10.3390/ijms18081692. Review.
    • Chemokine CXCL7 Heterodimers: Structural Insights, CXCR2 Receptor Function, and Glycosaminoglycan Interactions. Brown AJ, Joseph PR, Sawant KV, Rajarathnam K. Int J Mol Sci. 2017 Apr 1;18(4). pii: E748. doi: 10.3390/ijms18040748.
    • Structural Basis of Native CXCL7 Monomer Binding to CXCR2 Receptor N-Domain and Glycosaminoglycan Heparin. Brown AJ, Sepuru KM, Rajarathnam K. Int J Mol Sci. 2017 Feb 26;18(3). pii: E508. doi: 10.3390/ijms18030508.
    • Parallel ClickSeq and Nanopore sequencing elucidates the rapid evolution of defective-interfering RNAs in Flock House virus. Jaworski E, Routh A. PLoS Pathog. 2017 May 5;13(5):e1006365. doi: 10.1371/journal.ppat.1006365.
    • High-fidelity mass analysis unveils heterogeneity in intact ribosomal particles. van de Waterbeemd M, Fort KL, Boll D, Reinhardt-Szyba M, Routh A, Makarov A, Heck AJ. Nat Methods. 2017 Mar;14(3):283-286. doi: 10.1038/nmeth.4147.
    • Activator Protein-1: redox switch controlling structure and DNA-binding. Yin Z, Machius M, Nestler EJ, Rudenko G. Nucleic Acids Res. 2017 Nov 2;45(19):11425-11436. doi: 10.1093/nar/gkx795.
    • Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges. Gangwar SP, Zhong X, Seshadrinathan S, Chen H, Machius M, Rudenko G. Neuron. 2017 Jun 21;94(6):1132-1141.e4. doi: 10.1016/j.neuron.2017.06.009.
    • Molecular and Cellular Mechanisms of Synaptopathies. Ardiles AO, Grabrucker AM, Scholl FG, Rudenko G, Borsello T. Neural Plast. 2017;2017:2643943. doi: 10.1155/2017/2643943.
    • Dynamic Control of Synaptic Adhesion and Organizing Molecules in Synaptic Plasticity. Rudenko G. Neural Plast. 2017;2017:6526151. doi: 10.1155/2017/6526151.
    • K48-linked polyubiquitination of dengue virus NS1 protein inhibits its interaction with the viral partner NS4B. Giraldo MI, Vargas-Cuartas O, Gallego-Gomez JC, Shi PY, Padilla-Sanabria L, Castaño-Osorio JC, Rajsbaum R. Virus Res. 2017 Dec 30;246:1-11. doi: 10.1016/j.virusres.2017.12.013.
    • Small Molecules and Antibodies for Zika Therapy. Xie X, Zou J, Shan C, Shi PY. J Infect Dis. 2017 Dec 16;216(suppl_10):S945-S950. doi: 10.1093/infdis/jix406.
    • Functional Analysis of Glycosylation of Zika Virus Envelope Protein. Fontes-Garfias CR, Shan C, Luo H, Muruato AE, Medeiros DBA, Mays E, Xie X, Zou J, Roundy CM, Wakamiya M, Rossi SL, Wang T, Weaver SC, Shi PY. Cell Rep. 2017 Oct 31;21(5):1180-1190. doi: 10.1016/j.celrep.2017.10.016.
    • A single mutation in the prM protein of Zika virus contributes to fetal microcephaly. Yuan L, Huang XY, Liu ZY, Zhang F, Zhu XL, Yu JY, Ji X, Xu YP, Li G, Li C, Wang HJ, Deng YQ, Wu M, Cheng ML, Ye Q, Xie DY, Li XF, Wang X, Shi W, Hu B, Shi PY, Xu Z, Qin CF. Science. 2017 Nov 17;358(6365):933-936. doi: 10.1126/science.aam7120.
    • A single-dose live-attenuated vaccine prevents Zika virus pregnancy transmission and testis damage. Shan C, Muruato AE, Jagger BW, Richner J, Nunes BTD, Medeiros DBA, Xie X, Nunes JGC, Morabito KM, Kong WP, Pierson TC, Barrett AD, Weaver SC, Rossi SL, Vasconcelos PFC, Graham BS, Diamond MS, Shi PY. Nat Commun. 2017 Sep 22;8(1):676. doi: 10.1038/s41467-017-00737-8.
    • Zika Virus Infects Human Sertoli Cells and Modulates the Integrity of the In Vitro Blood-Testis Barrier Model. Siemann DN, Strange DP, Maharaj PN, Shi PY, Verma S. J Virol. 2017 Oct 27;91(22). pii: e00623-17. doi: 10.1128/JVI.00623-17.
    • Zika virus has oncolytic activity against glioblastoma stem cells. Zhu Z, Gorman MJ, McKenzie LD, Chai JN, Hubert CG, Prager BC, Fernandez E, Richner JM, Zhang R, Shan C, Tycksen E, Wang X, Shi PY, Diamond MS, Rich JN, Chheda MG. J Exp Med. 2017 Oct 2;214(10):2843-2857. doi: 10.1084/jem.20171093. Erratum in: J Exp Med. 2017 Sep 15;:.
    • Evaluation of a Novel Reporter Virus Neutralization Test for Serological Diagnosis of Zika and Dengue Virus Infection. Shan C, Ortiz DA, Yang Y, Wong SJ, Kramer LD, Shi PY, Loeffelholz MJ, Ren P. J Clin Microbiol. 2017 Oct;55(10):3028-3036. doi: 10.1128/JCM.00975-17.
    • Dengue subgenomic flaviviral RNA disrupts immunity in mosquito salivary glands to increase virus transmission. Pompon J, Manuel M, Ng GK, Wong B, Shan C, Manokaran G, Soto-Acosta R, Bradrick SS, Ooi EE, Missé D, Shi PY, Garcia-Blanco MA. PLoS Pathog. 2017 Jul 28;13(7):e1006535. doi: 10.1371/journal.ppat.1006535.
    • Vaccine Mediated Protection Against Zika Virus-Induced Congenital Disease. Richner JM, Jagger BW, Shan C, Fontes CR, Dowd KA, Cao B, Himansu S, Caine EA, Nunes BTD, Medeiros DBA, Muruato AE, Foreman BM, Luo H, Wang T, Barrett AD, Weaver SC, Vasconcelos PFC, Rossi SL, Ciaramella G, Mysorekar IU, Pierson TC, Shi PY, Diamond MS. Cell. 2017 Jul 13;170(2):273-283.e12. doi: 10.1016/j.cell.2017.06.040.
    • West Nile Virus NS1 Antagonizes Interferon Beta Production by Targeting RIG-I and MDA5. Zhang HL, Ye HQ, Liu SQ, Deng CL, Li XD, Shi PY, Zhang B. J Virol. 2017 Aug 24;91(18). pii: e02396-16. doi: 10.1128/JVI.02396-16.
    • Zika in the Americas, year 2: What have we learned? What gaps remain? A report from the Global Virus Network. Aliota MT, Bassit L, Bradrick SS, Cox B, Garcia-Blanco MA, Gavegnano C, Friedrich TC, Golos TG, Griffin DE, Haddow AD, Kallas EG, Kitron U, Lecuit M, Magnani DM, Marrs C, Mercer N, McSweegan E, Ng LFP, O'Connor DH, Osorio JE, Ribeiro GS, Ricciardi M, Rossi SL, Saade G, Schinazi RF, Schott-Lerner GO, Shan C, Shi PY, Watkins DI, Vasilakis N, Weaver SC. Antiviral Res. 2017 Aug;144:223-246. doi: 10.1016/j.antiviral.2017.06.001. Review.
    • Evolutionary enhancement of Zika virus infectivity in Aedes aegypti mosquitoes. Liu Y, Liu J, Du S, Shan C, Nie K, Zhang R, Li XF, Zhang R, Wang T, Qin CF, Wang P, Shi PY, Cheng G. Nature. 2017 May 25;545(7655):482-486. doi: 10.1038/nature22365.
    • Reverse Genetics of Zika Virus. Shan C, Xie X, Shi PY. Methods Mol Biol. 2017;1602:47-58. doi: 10.1007/978-1-4939-6964-7_4.
    • Adulthood Sequelae of Congenital Zika Virus Infection in Mice. Zou J, Shi PY. EBioMedicine. 2017 Jun;20:11-12. doi: 10.1016/j.ebiom.2017.05.005.
    • A live-attenuated Zika virus vaccine candidate induces sterilizing immunity in mouse models. Shan C, Muruato AE, Nunes BTD, Luo H, Xie X, Medeiros DBA, Wakamiya M, Tesh RB, Barrett AD, Wang T, Weaver SC, Vasconcelos PFC, Rossi SL, Shi PY. Nat Med. 2017 Jun;23(6):763-767. doi: 10.1038/nm.4322.
    • A Rapid Zika Diagnostic Assay to Measure Neutralizing Antibodies in Patients. Shan C, Xie X, Ren P, Loeffelholz MJ, Yang Y, Furuya A, Dupuis AP 2nd, Kramer LD, Wong SJ, Shi PY. EBioMedicine. 2017 Mar;17:157-162. doi: 10.1016/j.ebiom.2017.03.006.
    • Generation and characterization of West Nile pseudo-infectious reporter virus for antiviral screening. Zhang HL, Ye HQ, Deng CL, Liu SQ, Shi PY, Qin CF, Yuan ZM, Zhang B. Antiviral Res. 2017 May;141:38-47. doi: 10.1016/j.antiviral.2017.02.006.
    • A cDNA Clone-Launched Platform for High-Yield Production of Inactivated Zika Vaccine. Yang Y, Shan C, Zou J, Muruato AE, Bruno DN, de Almeida Medeiros Daniele B, Vasconcelos PFC, Rossi SL, Weaver SC, Xie X, Shi PY. EBioMedicine. 2017 Mar;17:145-156. doi: 10.1016/j.ebiom.2017.02.003.
    • Understanding Zika Virus Stability and Developing a Chimeric Vaccine through Functional Analysis. Xie X, Yang Y, Muruato AE, Zou J, Shan C, Nunes BT, Medeiros DB, Vasconcelos PF, Weaver SC, Rossi SL, Shi PY. MBio. 2017 Feb 7;8(1). pii: e02134-16. doi: 10.1128/mBio.02134-16.
    • A Multiplex Microsphere Immunoassay for Zika Virus Diagnosis. Wong SJ, Furuya A, Zou J, Xie X, Dupuis AP 2nd, Kramer LD, Shi PY. EBioMedicine. 2017 Feb;16:136-140. doi: 10.1016/j.ebiom.2017.01.008.
    • RPLP1 and RPLP2 Are Essential Flavivirus Host Factors That Promote Early Viral Protein Accumulation. Campos RK, Wong B, Xie X, Lu YF, Shi PY, Pompon J, Garcia-Blanco MA, Bradrick SS. J Virol. 2017 Jan 31;91(4). pii: e01706-16. doi: 10.1128/JVI.01706-16.
    • Glutamate Dehydrogenase, a Complex Enzyme at a Crucial Metabolic Branch Point. Smith HQ, Li C, Stanley CA, Smith TJ. Neurochem Res. 2017 Oct 27. doi: 10.1007/s11064-017-2428-0.
    • Norovirus Escape from Broadly Neutralizing Antibodies Is Limited to Allostery-Like Mechanisms. Kolawole AO, Smith HQ, Svoboda SA, Lewis MS, Sherman MB, Lynch GC, Pettitt BM, Smith TJ, Wobus CE. mSphere. 2017 Oct 18;2(5). pii: e00334-17. doi: 10.1128/mSphere.00334-17.
    • Stability of Cucumber Necrosis Virus at the Quasi-6-Fold Axis Affects Zoospore Transmission. Sherman MB, Kakani K, Rochon D, Jiang W, Voss NR, Smith TJ. J Virol. 2017 Sep 12;91(19). pii: e01030-17. doi: 10.1128/JVI.01030-17.
    • Antibody-induced uncoating of human rhinovirus B14. Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG. Proc Natl Acad Sci U S A. 2017 Jul 25;114(30):8017-8022. doi: 10.1073/pnas.1707369114.
    • A severe case of hyperinsulinism due to hemizygous activating mutation of glutamate dehydrogenase. Barrosse-Antle M, Su C, Chen P, Boodhansingh KE, Smith TJ, Stanley CA, De León DD, Li C. Pediatr Diabetes. 2017 Dec;18(8):911-916. doi: 10.1111/pedi.12507.
    • Proteome Analysis of Hypoxic Glioblastoma Cells Reveals Sequential Metabolic Adaptation of One-Carbon Metabolic Pathways. Zhang K, Xu P, Sowers JL, Machuca DF, Mirfattah B, Herring J, Tang H, Chen Y, Tian B, Brasier AR, Sowers LC. Mol Cell Proteomics. 2017 Nov;16(11):1906-1921. doi: 10.1074/mcp.RA117.000154.
    • MeCP2 recognizes cytosine methylated tri-nucleotide and di-nucleotide sequences to tune transcription in the mammalian brain. Lagger S, Connelly JC, Schweikert G, Webb S, Selfridge J, Ramsahoye BH, Yu M, He C, Sanguinetti G, Sowers LC, Walkinshaw MD, Bird A. PLoS Genet. 2017 May 12;13(5):e1006793. doi: 10.1371/journal.pgen.1006793.
    • Genome-Wide RNAi Screens for RNA Processing Events in Drosophila melanogaster S2 Cells. Peart N, Wagner EJ. Methods Mol Biol. 2017;1648:235-245. doi: 10.1007/978-1-4939-7204-3_17.
    • Human mutations in integrator complex subunits link transcriptome integrity to brain development. Oegema R, Baillat D, Schot R, van Unen LM, Brooks A, Kia SK, Hoogeboom AJM, Xia Z, Li W, Cesaroni M, Lequin MH, van Slegtenhorst M, Dobyns WB, de Coo IFM, Verheijen FW, Kremer A, van der Spek PJ, Heijsman D, Wagner EJ, Fornerod M, Mancini GMS. PLoS Genet. 2017 May 25;13(5):e1006809. doi: 10.1371/journal.pgen.1006809. Erratum in: PLoS Genet. 2017 Aug 1;13(8):e1006923.
    • A distal auxiliary element facilitates cleavage and polyadenylation of Dux4 mRNA in the pathogenic haplotype of FSHD. Peart N, Wagner EJ. Hum Genet. 2017 Sep;136(9):1291-1301. doi: 10.1007/s00439-017-1813-8.
    • Poly(A)-ClickSeq: click-chemistry for next-generation 3'-end sequencing without RNA enrichment or fragmentation. Routh A, Ji P, Jaworski E, Xia Z, Li W, Wagner EJ. Nucleic Acids Res. 2017 Jul 7;45(12):e112. doi: 10.1093/nar/gkx286.
    • Molecular basis for the interaction between Integrator subunits IntS9 and IntS11 and its functional importance. Wu Y, Albrecht TR, Baillat D, Wagner EJ, Tong L. Proc Natl Acad Sci U S A. 2017 Apr 25;114(17):4394-4399. doi: 10.1073/pnas.1616605114.
    • Structure-Activity Relationship for Small Molecule Inhibitors of Nicotinamide N-Methyltransferase. Neelakantan H, Wang HY, Vance V, Hommel JD, McHardy SF, Watowich SJ. J Med Chem. 2017 Jun 22;60(12):5015-5028. doi: 10.1021/acs.jmedchem.7b00389.
    • Noncoupled Fluorescent Assay for Direct Real-Time Monitoring of Nicotinamide N-Methyltransferase Activity. Neelakantan H, Vance V, Wang HL, McHardy SF, Watowich SJ. Biochemistry. 2017 Feb 14;56(6):824-832. doi: 10.1021/acs.biochem.6b01215.
    • Chikungunya Outbreak in Kedougou, Southeastern Senegal in 2009-2010. Sow A, Faye O, Diallo M, Diallo D, Chen R, Faye O, Diagne CT, Guerbois M, Weidmann M, Ndiaye Y, Senghor CS, Faye A, Diop OM, Sadio B, Ndiaye O, Watts D, Hanley KA, Dia AT, Malvy D, Weaver SC, Sall AA. Open Forum Infect Dis. 2017 Dec 2;5(1):ofx259. doi: 10.1093/ofid/ofx259.
    • African and Asian Zika Virus Isolates Display Phenotypic Differences Both In Vitro and In Vivo. Smith DR, Sprague TR, Hollidge BS, Valdez SM, Padilla SL, Bellanca SA, Golden JW, Coyne SR, Kulesh DA, Miller LJ, Haddow AD, Koehler JW, Gromowski GD, Jarman RG, Alera MTP, Yoon IK, Buathong R, Lowen RG, Kane CD, Minogue TD, Bavari S, Tesh RB, Weaver SC, Linthicum KJ, Pitt ML, Nasar F. Am J Trop Med Hyg. 2017 Dec 26. doi: 10.4269/ajtmh.17-0685.
    • Biotechnological Applications of an Insect-Specific Alphavirus. Erasmus JH, Weaver SC. DNA Cell Biol. 2017 Dec;36(12):1045-1049. doi: 10.1089/dna.2017.4019.
    • Lack of evidence for Zika virus transmission by Culex mosquitoes. Roundy CM, Azar SR, Brault AC, Ebel GD, Failloux AB, Fernandez-Salas I, Kitron U, Kramer LD, Lourenço-de-Oliveira R, Osorio JE, Paploski ID, Vazquez-Prokopec GM, Ribeiro GS, Ritchie SA, Tauro LB, Vasilakis N, Weaver SC. Emerg Microbes Infect. 2017 Oct 18;6(10):e90. doi: 10.1038/emi.2017.85. No abstract available.
    • Enzootic Circulation of Chikungunya Virus in East Africa: Serological Evidence in Non-human Kenyan Primates. Eastwood G, Sang RC, Guerbois M, Taracha ELN, Weaver SC. Am J Trop Med Hyg. 2017 Nov;97(5):1399-1404. doi: 10.4269/ajtmh.17-0126.
    • The reintroduction of DENV-2 in 2011 in Panama and subsequent outbreak characteristic. Díaz Y, Cisneros J, Guzmán H, Cordoba P, Carrera JP, Moreno B, Chen R, Mewa JC, García L, Cerezo L, da Rosa AT, Gundacker ND, Armién B, Weaver SC, Vasilakis N, López-Vergès S, Tesh R. Acta Trop. 2018 Jan;177:58-65. doi: 10.1016/j.actatropica.2017.09.031.
    • Zika, Chikungunya, and Other Emerging Vector-Borne Viral Diseases. Weaver SC, Charlier C, Vasilakis N, Lecuit M. Annu Rev Med. 2017 Aug 28. doi: 10.1146/annurev-med-050715-105122.
    • Differential Vector Competency of Aedes albopictus Populations from the Americas for Zika Virus. Azar SR, Roundy CM, Rossi SL, Huang JH, Leal G, Yun R, Fernandez-Salas I, Vitek CJ, Paploski IAD, Stark PM, Vela J, Debboun M, Reyna M, Kitron U, Ribeiro GS, Hanley KA, Vasilakis N, Weaver SC. Am J Trop Med Hyg. 2017 Aug;97(2):330-339. doi: 10.4269/ajtmh.16-0969.
    • O'nyong-nyong fever: a neglected mosquito-borne viral disease. Rezza G, Chen R, Weaver SC. Pathog Glob Health. 2017 Sep;111(6):271-275. doi: 10.1080/20477724.2017.1355431.
    • Viral Retinopathy in Experimental Models of Zika Infection. Zhao Z, Yang M, Azar SR, Soong L, Weaver SC, Sun J, Chen Y, Rossi SL, Cai J. Invest Ophthalmol Vis Sci. 2017 Aug 1;58(10):4355–4365. doi: 10.1167/iovs.17-22016.
    • Evolution and spread of Venezuelan equine encephalitis complex alphavirus in the Americas. Forrester NL, Wertheim JO, Dugan VG, Auguste AJ, Lin D, Adams AP, Chen R, Gorchakov R, Leal G, Estrada-Franco JG, Pandya J, Halpin RA, Hari K, Jain R, Stockwell TB, Das SR, Wentworth DE, Smith MD, Kosakovsky Pond SL, Weaver SC. PLoS Negl Trop Dis. 2017 Aug 3;11(8):e0005693. doi: 10.1371/journal.pntd.0005693.
    • Serologic Evidence of Various Arboviruses Detected in White-Tailed Deer (Odocoileus virginianus) in the United States. Pedersen K, Wang E, Weaver SC, Wolf PC, Randall AR, Van Why KR, Travassos Da Rosa APA, Gidlewski T. Am J Trop Med Hyg. 2017 Aug;97(2):319-323. doi: 10.4269/ajtmh.17-0180.
    • Knowledge and Prevention Practices among U.S. Pregnant Immigrants from Zika Virus Outbreak Areas. Berenson AB, Trinh HN, Hirth JM, Guo F, Fuchs EL, Weaver SC. Am J Trop Med Hyg. 2017 Jul;97(1):155-162. doi: 10.4269/ajtmh.17-0062.
    • Effect of an intervention in storm drains to prevent Aedes aegypti reproduction in Salvador, Brazil. Souza RL, Mugabe VA, Paploski IAD, Rodrigues MS, Moreira PSDS, Nascimento LCJ, Roundy CM, Weaver SC, Reis MG, Kitron U, Ribeiro GS. Parasit Vectors. 2017 Jul 11;10(1):328. doi: 10.1186/s13071-017-2266-6.
    • Zika in the Americas, year 2: What have we learned? What gaps remain? A report from the Global Virus Network. Aliota MT, Bassit L, Bradrick SS, Cox B, Garcia-Blanco MA, Gavegnano C, Friedrich TC, Golos TG, Griffin DE, Haddow AD, Kallas EG, Kitron U, Lecuit M, Magnani DM, Marrs C, Mercer N, McSweegan E, Ng LFP, O'Connor DH, Osorio JE, Ribeiro GS, Ricciardi M, Rossi SL, Saade G, Schinazi RF, Schott-Lerner GO, Shan C, Shi PY, Watkins DI, Vasilakis N, Weaver SC. Antiviral Res. 2017 Aug;144:223-246. doi: 10.1016/j.antiviral.2017.06.001. Review.
    • Understanding the evolution and spread of chikungunya virus in the Americas using complete genome sequences. Sahadeo NSD, Allicock OM, De Salazar PM, Auguste AJ, Widen S, Olowokure B, Gutierrez C, Valadere AM, Polson-Edwards K, Weaver SC, Carrington CVF. Virus Evol. 2017 May 3;3(1):vex010. doi: 10.1093/ve/vex010.
    • Host oxidative folding pathways offer novel anti-chikungunya virus drug targets with broad spectrum potential. Langsjoen RM, Auguste AJ, Rossi SL, Roundy CM, Penate HN, Kastis M, Schnizlein MK, Le KC, Haller SL, Chen R, Watowich SJ, Weaver SC. Antiviral Res. 2017 Jul;143:246-251. doi: 10.1016/j.antiviral.2017.04.014.
    • Insect-Specific Viruses: A Historical Overview and Recent Developments. Roundy CM, Azar SR, Rossi SL, Weaver SC, Vasilakis N. Adv Virus Res. 2017;98:119-146. doi: 10.1016/bs.aivir.2016.10.001. Review.
    • Differential Responses of Human Fetal Brain Neural Stem Cells to Zika Virus Infection. McGrath EL, Rossi SL, Gao J, Widen SG, Grant AC, Dunn TJ, Azar SR, Roundy CM, Xiong Y, Prusak DJ, Loucas BD, Wood TG, Yu Y, Fernández-Salas I, Weaver SC, Vasilakis N, Wu P. Stem Cell Reports. 2017 Mar 14;8(3):715-727. doi: 10.1016/j.stemcr.2017.01.008.
    • Recombinant Isfahan Virus and Vesicular Stomatitis Virus Vaccine Vectors Provide Durable, Multivalent, Single-Dose Protection against Lethal Alphavirus Challenge. Nasar F, Matassov D, Seymour RL, Latham T, Gorchakov RV, Nowak RM, Leal G, Hamm S, Eldridge JH, Tesh RB, Clarke DK, Weaver SC. J Virol. 2017 Mar 29;91(8). pii: e01729-16. doi: 10.1128/JVI.01729-16.
    • Emergence of Epidemic Zika Virus Transmission and Congenital Zika Syndrome: Are Recently Evolved Traits to Blame? Weaver SC. MBio. 2017 Jan 10;8(1). pii: e02063-16. doi: 10.1128/mBio.02063-16.
    • Molecular Virologic and Clinical Characteristics of a Chikungunya Fever Outbreak in La Romana, Dominican Republic, 2014. Langsjoen RM, Rubinstein RJ, Kautz TF, Auguste AJ, Erasmus JH, Kiaty-Figueroa L, Gerhardt R, Lin D, Hari KL, Jain R, Ruiz N, Muruato AE, Silfa J, Bido F, Dacso M, Weaver SC. PLoS Negl Trop Dis. 2016 Dec 28;10(12):e0005189. doi: 10.1371/journal.pntd.0005189.
    • Epidemic arboviral diseases: priorities for research and public health. Wilder-Smith A, Gubler DJ, Weaver SC, Monath TP, Heymann DL, Scott TW. Lancet Infect Dis. 2017 Mar;17(3):e101-e106. doi: 10.1016/S1473-3099(16)30518-7. Review.
    • A chikungunya fever vaccine utilizing an insect-specific virus platform. Erasmus JH, Auguste AJ, Kaelber JT, Luo H, Rossi SL, Fenton K, Leal G, Kim DY, Chiu W, Wang T, Frolov I, Nasar F, Weaver SC. Nat Med. 2017 Feb;23(2):192-199. doi: 10.1038/nm.4253.
    • A domain in human EXOG converts apoptotic endonuclease to DNA-repair exonuclease. Szymanski MR, Yu W, Gmyrek AM, White MA, Molineux IJ, Lee JC, Yin YW. Nat Commun. 2017 May 3;8:14959. doi: 10.1038/ncomms14959.